Analisis

Author

Josue Jhonatan colunche Vasquez

1 Project Setup

Code 
source('https://inkaverse.com/setup.r')
Project directory:  C:/Users/HP/Desktop/JOSUE_2026/CURSOS _2026_I/PRODUCCION Y TECNOLOGIA DE SEMILLAS/UNID_01/GRUP_ZANAHORIA 
CPU cores detected:  8 
CPU cores in use:  6 
─ Session info ───────────────────────────────────────────────────────────────
 setting  value
 version  R version 4.5.3 (2026-03-11 ucrt)
 os       Windows 11 x64 (build 26200)
 system   x86_64, mingw32
 ui       RTerm
 language (EN)
 collate  Spanish_Spain.utf8
 ctype    Spanish_Spain.utf8
 tz       America/Bogota
 date     2026-04-20
 pandoc   3.6.3 @ C:/Program Files/RStudio/resources/app/bin/quarto/bin/tools/ (via rmarkdown)
 quarto   NA @ C:\\PROGRA~1\\RStudio\\RESOUR~1\\app\\bin\\quarto\\bin\\quarto.exe

─ Packages ───────────────────────────────────────────────────────────────────
 package       * version date (UTC) lib source
 abind           1.4-8   2024-09-12 [1] CRAN (R 4.5.0)
 agricolae       1.3-7   2023-10-22 [1] CRAN (R 4.5.1)
 AlgDesign       1.2.1.2 2025-04-06 [1] CRAN (R 4.5.0)
 askpass         1.2.1   2024-10-04 [1] CRAN (R 4.5.0)
 boot            1.3-32  2025-08-29 [1] CRAN (R 4.5.2)
 cachem          1.1.0   2024-05-16 [1] CRAN (R 4.5.0)
 car           * 3.1-5   2026-02-03 [1] CRAN (R 4.5.3)
 carData       * 3.0-6   2026-01-30 [1] CRAN (R 4.5.3)
 cellranger      1.1.0   2016-07-27 [1] CRAN (R 4.5.0)
 cli             3.6.5   2025-04-23 [1] CRAN (R 4.5.2)
 cluster         2.1.8.2 2026-02-05 [2] CRAN (R 4.5.3)
 codetools       0.2-20  2024-03-31 [2] CRAN (R 4.5.3)
 coro            1.1.0   2024-11-05 [1] CRAN (R 4.5.1)
 cowplot       * 1.2.0   2025-07-07 [1] CRAN (R 4.5.2)
 curl            7.0.0   2025-08-19 [1] CRAN (R 4.5.1)
 devtools      * 2.5.0   2026-03-14 [1] CRAN (R 4.5.3)
 digest          0.6.39  2025-11-19 [1] CRAN (R 4.5.2)
 dplyr         * 1.1.4   2023-11-17 [1] CRAN (R 4.5.1)
 DT              0.34.0  2025-09-02 [1] CRAN (R 4.5.2)
 ellipsis        0.3.2   2021-04-29 [1] CRAN (R 4.5.0)
 ellmer          0.4.0   2025-11-15 [1] CRAN (R 4.5.2)
 emmeans       * 2.0.3   2026-04-09 [1] CRAN (R 4.5.3)
 estimability    1.5.1   2024-05-12 [1] CRAN (R 4.5.0)
 evaluate        1.0.5   2025-08-27 [1] CRAN (R 4.5.2)
 FactoMineR    * 2.14    2026-04-08 [1] CRAN (R 4.5.3)
 farver          2.1.2   2024-05-13 [1] CRAN (R 4.5.0)
 fastmap         1.2.0   2024-05-15 [1] CRAN (R 4.5.0)
 flashClust      1.1-4   2026-03-03 [1] CRAN (R 4.5.2)
 forcats       * 1.0.1   2025-09-25 [1] CRAN (R 4.5.2)
 Formula         1.2-5   2023-02-24 [1] CRAN (R 4.5.0)
 fs              2.0.1   2026-03-24 [1] CRAN (R 4.5.3)
 gargle          1.6.1   2026-01-29 [1] CRAN (R 4.5.3)
 generics        0.1.4   2025-05-09 [1] CRAN (R 4.5.2)
 ggplot2       * 4.0.2   2026-02-03 [1] CRAN (R 4.5.3)
 ggrepel         0.9.8   2026-03-17 [1] CRAN (R 4.5.3)
 glue            1.8.0   2024-09-30 [1] CRAN (R 4.5.0)
 googledrive   * 2.1.2   2025-09-10 [1] CRAN (R 4.5.2)
 googlesheets4 * 1.1.2   2025-09-03 [1] CRAN (R 4.5.1)
 gtable          0.3.6   2024-10-25 [1] CRAN (R 4.5.0)
 hms             1.1.4   2025-10-17 [1] CRAN (R 4.5.2)
 htmltools       0.5.9   2025-12-04 [1] CRAN (R 4.5.2)
 htmlwidgets     1.6.4   2023-12-06 [1] CRAN (R 4.5.0)
 httpuv          1.6.17  2026-03-18 [1] CRAN (R 4.5.3)
 httr            1.4.8   2026-02-13 [1] CRAN (R 4.5.3)
 httr2           1.2.2   2025-12-08 [1] CRAN (R 4.5.2)
 huito         * 0.2.6   2025-10-18 [1] CRAN (R 4.5.2)
 inti          * 0.6.92  2026-03-23 [1] CRAN (R 4.5.3)
 jsonlite        2.0.0   2025-03-27 [1] CRAN (R 4.5.0)
 knitr         * 1.51    2025-12-20 [1] CRAN (R 4.5.2)
 later           1.4.8   2026-03-05 [1] CRAN (R 4.5.3)
 lattice         0.22-9  2026-02-09 [2] CRAN (R 4.5.3)
 leaps           3.2     2024-06-10 [1] CRAN (R 4.5.0)
 lifecycle       1.0.5   2026-01-08 [1] CRAN (R 4.5.3)
 lme4          * 2.0-1   2026-03-05 [1] CRAN (R 4.5.2)
 lubridate     * 1.9.5   2026-02-04 [1] CRAN (R 4.5.3)
 magick        * 2.9.1   2026-02-28 [1] CRAN (R 4.5.3)
 magrittr        2.0.3   2022-03-30 [1] CRAN (R 4.5.0)
 MASS          * 7.3-65  2025-02-28 [2] CRAN (R 4.5.3)
 Matrix        * 1.7-5   2026-03-21 [1] CRAN (R 4.5.3)
 memoise         2.0.1   2021-11-26 [1] CRAN (R 4.5.0)
 mime            0.13    2025-03-17 [1] CRAN (R 4.5.0)
 minqa           1.2.8   2024-08-17 [1] CRAN (R 4.5.0)
 mnormt          2.1.2   2026-01-27 [1] CRAN (R 4.5.2)
 multcomp      * 1.4-30  2026-03-09 [1] CRAN (R 4.5.3)
 multcompView    0.1-11  2026-02-16 [1] CRAN (R 4.5.3)
 mvtnorm       * 1.3-6   2026-03-15 [1] CRAN (R 4.5.3)
 nlme            3.1-169 2026-03-27 [1] CRAN (R 4.5.3)
 nloptr          2.2.1   2025-03-17 [1] CRAN (R 4.5.0)
 openssl         2.3.5   2026-02-26 [1] CRAN (R 4.5.3)
 otel            0.2.0   2025-08-29 [1] CRAN (R 4.5.2)
 pillar          1.11.1  2025-09-17 [1] CRAN (R 4.5.2)
 pkgbuild        1.4.8   2025-05-26 [1] CRAN (R 4.5.2)
 pkgconfig       2.0.3   2019-09-22 [1] CRAN (R 4.5.0)
 pkgload         1.5.1   2026-04-01 [1] CRAN (R 4.5.3)
 promises        1.5.0   2025-11-01 [1] CRAN (R 4.5.2)
 psych         * 2.6.3   2026-03-25 [1] CRAN (R 4.5.3)
 purrr         * 1.2.2   2026-04-10 [1] CRAN (R 4.5.3)
 R6              2.6.1   2025-02-15 [1] CRAN (R 4.5.0)
 rappdirs        0.3.3   2021-01-31 [1] CRAN (R 4.5.0)
 rbibutils       2.4.1   2026-01-21 [1] CRAN (R 4.5.3)
 RColorBrewer    1.1-3   2022-04-03 [1] CRAN (R 4.5.0)
 Rcpp            1.1.1   2026-01-10 [1] CRAN (R 4.5.3)
 Rdpack          2.6.6   2026-02-08 [1] CRAN (R 4.5.3)
 readr         * 2.2.0   2026-02-19 [1] CRAN (R 4.5.3)
 reformulas      0.4.4   2026-02-02 [1] CRAN (R 4.5.3)
 RhpcBLASctl   * 0.23-42 2023-02-11 [1] CRAN (R 4.5.2)
 rlang           1.1.7   2026-01-09 [1] CRAN (R 4.5.3)
 rmarkdown       2.31    2026-03-26 [1] CRAN (R 4.5.3)
 rstudioapi      0.18.0  2026-01-16 [1] CRAN (R 4.5.3)
 S7              0.2.0   2024-11-07 [1] CRAN (R 4.5.1)
 sandwich        3.1-1   2024-09-15 [1] CRAN (R 4.5.0)
 scales          1.4.0   2025-04-24 [1] CRAN (R 4.5.1)
 scatterplot3d   0.3-45  2026-02-23 [1] CRAN (R 4.5.2)
 sessioninfo   * 1.2.3   2025-02-05 [1] CRAN (R 4.5.0)
 shiny         * 1.13.0  2026-02-20 [1] CRAN (R 4.5.3)
 showtext        0.9-8   2026-03-21 [1] CRAN (R 4.5.3)
 showtextdb      3.0     2020-06-04 [1] CRAN (R 4.5.0)
 stringi         1.8.7   2025-03-27 [1] CRAN (R 4.5.0)
 stringr       * 1.6.0   2025-11-04 [1] CRAN (R 4.5.2)
 survival      * 3.8-6   2026-01-16 [2] CRAN (R 4.5.3)
 sysfonts        0.8.9   2024-03-02 [1] CRAN (R 4.5.0)
 TH.data       * 1.1-5   2025-11-17 [1] CRAN (R 4.5.2)
 tibble        * 3.3.1   2026-01-11 [1] CRAN (R 4.5.3)
 tidyr         * 1.3.2   2025-12-19 [1] CRAN (R 4.5.3)
 tidyselect      1.2.1   2024-03-11 [1] CRAN (R 4.5.0)
 tidyverse     * 2.0.0   2023-02-22 [1] CRAN (R 4.5.1)
 timechange      0.4.0   2026-01-29 [1] CRAN (R 4.5.3)
 tzdb            0.5.0   2025-03-15 [1] CRAN (R 4.5.0)
 usethis       * 3.2.1   2025-09-06 [1] CRAN (R 4.5.2)
 vctrs           0.6.5   2023-12-01 [1] CRAN (R 4.5.0)
 withr           3.0.2   2024-10-28 [1] CRAN (R 4.5.0)
 xfun            0.57    2026-03-20 [1] CRAN (R 4.5.3)
 xtable          1.8-8   2026-02-22 [1] CRAN (R 4.5.3)
 yaml            2.3.12  2025-12-10 [1] CRAN (R 4.5.3)
 zoo             1.8-15  2025-12-15 [1] CRAN (R 4.5.3)

 [1] C:/Users/HP/AppData/Local/R/win-library/4.5
 [2] C:/Program Files/R/R-4.5.3/library
 * ── Packages attached to the search path.

──────────────────────────────────────────────────────────────────────────────

2 Data import

Code 
gs <- "https://docs.google.com/spreadsheets/d/1jhF2lV6rksG_t3W5OkBvq6jgzAiZ78nCOap2Bf8QarQ/edit?gid=1844291628#gid=1844291628" %>% 
  as_sheets_id()

fb <- gs %>% 
  range_read(ss = .,sheet = "fb")

3 Research Objective

Code 

fb <- fb %>%
  mutate(
    luz    = as.factor(luz),
    ntreat = as.factor(ntreat),
    rep    = as.factor(rep),
    plots  = as.factor(plots),
    rows   = as.factor(rows),
    cols   = as.factor(cols)
  )

str(fb)
## tibble [12 × 22] (S3: tbl_df/tbl/data.frame)
##  $ qrcode : chr [1:12] "CHACHAPOYAS_2026-04-13_1001_no" "CHACHAPOYAS_2026-04-13_1002_no" "CHACHAPOYAS_2026-04-13_1003_no" "CHACHAPOYAS_2026-04-13_1004_si" ...
##  $ plots  : Factor w/ 12 levels "1001","1002",..: 1 2 3 4 5 6 7 8 9 10 ...
##  $ ntreat : Factor w/ 2 levels "1","2": 2 2 2 1 1 2 1 2 2 1 ...
##  $ luz    : Factor w/ 2 levels "no","si": 1 1 1 2 2 1 2 1 1 2 ...
##  $ sort   : num [1:12] 1 2 3 4 5 6 7 8 9 10 ...
##  $ rep    : Factor w/ 6 levels "1","2","3","4",..: 1 4 5 5 4 6 6 3 2 1 ...
##  $ seeds  : num [1:12] 25 25 25 25 25 25 25 25 25 25 ...
##  $ rows   : Factor w/ 6 levels "1","2","3","4",..: 1 1 2 2 3 3 4 4 5 5 ...
##  $ cols   : Factor w/ 2 levels "1","2": 1 2 1 2 1 2 1 2 1 2 ...
##  $ ger_0  : num [1:12] 0 0 0 0 0 0 0 0 0 0 ...
##  $ ger_1  : num [1:12] 0 0 0 0 0 0 0 0 0 0 ...
##  $ ger_2  : num [1:12] 9 7 9 7 10 3 5 6 3 6 ...
##  $ ger_3  : num [1:12] 14 13 14 17 15 9 15 14 8 17 ...
##  $ ger_4  : num [1:12] 20 19 18 24 20 15 23 22 17 21 ...
##  $ ger_5  : num [1:12] 22 21 20 25 22 15 24 23 19 22 ...
##  $ ger_6  : num [1:12] 22 23 20 25 22 17 25 25 19 24 ...
##  $ ger_7  : num [1:12] 24 23 0 0 0 24 0 0 23 0 ...
##  $ lgr_7_1: num [1:12] 2.2 2.6 4 1.4 3.4 2 1.2 3.2 2.3 1.2 ...
##  $ lgr_7_2: num [1:12] 3.1 2.3 3.1 1.5 1.9 2.5 1.3 2.8 1.5 1.5 ...
##  $ lgr_7_3: num [1:12] 2.4 1.7 2.8 1.8 1 1.2 1.5 3 2.6 1 ...
##  $ lgr_7_4: num [1:12] 1.9 0.9 3.2 1.9 1.4 1.7 1.8 2.1 2.4 2.1 ...
##  $ lgr_7_5: num [1:12] 1.5 1.5 2.3 1 1.7 2.3 1.7 2.6 1 2.6 ...
#view(fb)